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Intron Name: Anas_platyrhynchos_platyrhynchos_6_22176768_22176929_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

22176768 - 22176929

Intron Length:

162

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAACTGGT

5'SS Class:

strong_major

3'SS Sequence:

CTCTGTTCTTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCGTGAT

U12 Branch Point Sequence:

GGATCGTGATGC

Flanking Amino Acid:

RSARDSGMKFSVCIQRCLSS

Intron Amino Acid Position:

236

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.1

0.76

1.1

76.2

39.9

Major BPS

68.7

0.46

1.3

59.3

47.1

Major PPT

82.8

0.74

0.8

80.3

31.8

Minor 5ss

-1.1

3.3

58.7

45.8

Minor BPS

37.8

-0.9

2.3

45.75

42.3

Associated Gene:

Gene:

CUTC

Ensembl Gene ID:

ENSAPLG00000029466

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047651

22176300 - 22181238

4939

ENSAPLT00000024264

22176230 - 22181238

5009