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Intron Name: Anas_platyrhynchos_platyrhynchos_6_22180397_22180531_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

22180397 - 22180531

Intron Length:

135

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGGGGA

5'SS Class:

strong_major

3'SS Sequence:

TGCCGCCCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GGCTGAC

U12 Branch Point Sequence:

CCGGGCTGACGG

Flanking Amino Acid:

QQRPPRAASAGMEDGFLMEV

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.2

0.81

0.9

69.2

37.4

Major BPS

49.4

-0

1.3

42.8

41.8

Major PPT

65.5

0.35

0.9

57.9

33.2

Minor 5ss

23.1

-3.1

3.2

43.5

Minor BPS

32.1

-1.4

2.1

26.53

42.6

Associated Gene:

Gene:

CUTC

Ensembl Gene ID:

ENSAPLG00000029466

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024264

22176230 - 22181238

5009

ENSAPLT00000019434

22176230 - 22181238

5009