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Intron Name: Anas_platyrhynchos_platyrhynchos_6_22234226_22234585_R


Intron Information:

Intron Rank:
2

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
22234226 - 22234585

Intron Length:
360

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
ACA|GTTAGTGTC

5'SS Class:
major

3'SS Sequence:
TCTTTGCCCACAG|C

3'SS Class:
major_PPT

U2 Branch Point Sequence:
CTTCCAC

U12 Branch Point Sequence:
GTAACTTCCACT

Flanking Amino Acid:
SEILDETDLYTDNRKKERVP

Intron Amino Acid Position:
208

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
65.1
0.36
1.2
65.8
38.5

Major BPS
55.1
0.13
1.3
67.8
38.2

Major PPT
78.5
0.64
0.8
72.5
32.4

Minor 5ss
35.8
-1.6
3.2
51.2
39.3

Minor BPS
47.4
-0.1
2
66.79
43.5

Associated Gene:

Gene:
CNNM1

Ensembl Gene ID:

Chromosome:
6

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

22229302 - 22245355
16054