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Intron Name: Anas_platyrhynchos_platyrhynchos_6_22260046_22261199_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

22260046 - 22261199

Intron Length:

1154

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGGCGC

5'SS Class:

major

3'SS Sequence:

GCTGCCCTCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCTCAT

U12 Branch Point Sequence:

TGGCCCTCATGG

Flanking Amino Acid:

GGPRRRRKAQAGDRRALPVE

Intron Amino Acid Position:

220

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.9

0.63

1.1

60.9

40.7

Major BPS

0.5

1.1

71.2

35.2

Major PPT

68.3

0.41

0.9

57.8

38.5

Minor 5ss

29.7

-2.3

3.5

41.4

45.3

Minor BPS

42.4

-0.7

2.1

45.92

46.1

Associated Gene:

Gene:

HPSE2

Ensembl Gene ID:

ENSAPLG00000027024

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024628

22259389 - 22350960

91572