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Intron Name: Anas_platyrhynchos_platyrhynchos_6_22261370_22262368_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

22261370 - 22262368

Intron Length:

999

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGGCAG

5'SS Class:

strong_major

3'SS Sequence:

CTCCTCTCCCCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCTCAG

U12 Branch Point Sequence:

GCCCCCTCAGCC

Flanking Amino Acid:

IIHDGWLDFLSSRRLVTLAR

Intron Amino Acid Position:

276

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.3

0.88

0.9

69.6

42.7

Major BPS

48.4

-0.1

1.5

56.9

40.5

Major PPT

76.6

0.6

0.7

68.6

31.8

Minor 5ss

30.1

-2.3

3.2

37.6

47.1

Minor BPS

-0.2

1.8

53.01

44.1

Associated Gene:

Gene:

HPSE2

Ensembl Gene ID:

ENSAPLG00000027024

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024628

22259389 - 22350960

91572