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Intron Name: Anas_platyrhynchos_platyrhynchos_6_2228946_2238637_R

Intron Information:

Intron Rank:

146106

Intron Class:

major

Intron Phase:

Intron Coordinates:

2228946 - 2238637

Intron Length:

9692

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGCAAG

5'SS Class:

strong_major

3'SS Sequence:

CTTTTCTTGCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTGTAT

U12 Branch Point Sequence:

ATGTGTGTATTT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.6

0.93

0.9

77.9

38.6

Major BPS

56.3

0.16

1.5

57.4

49.1

Major PPT

81.9

0.72

0.9

76.7

37.4

Minor 5ss

38.7

-1.3

2.8

47.8

47.9

Minor BPS

41.5

-0.5

2.4

61.09

43.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000026012

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030694

2228560 - 2239662

11103