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Intron Name: Anas_platyrhynchos_platyrhynchos_6_22338103_22340326_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

22338103 - 22340326

Intron Length:

2224

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTGCGTGAG

5'SS Class:

major

3'SS Sequence:

GTGTCTTGCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATAGGAG

U12 Branch Point Sequence:

GTGTCTTGCACA

Flanking Amino Acid:

LSDQIRKIQKVVNTYTPGKK

Intron Amino Acid Position:

530

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.6

0.49

62.3

38.4

Major BPS

40.9

-0.5

1.6

37.2

42.1

Major PPT

69.6

0.44

64.3

41.5

Minor 5ss

27.2

-2.6

3.2

30.5

37.2

Minor BPS

50.1

-0

1.9

64.7

41.8

Associated Gene:

Gene:

HPSE2

Ensembl Gene ID:

ENSAPLG00000027024

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024628

22259389 - 22350960

91572