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Intron Name: Anas_platyrhynchos_platyrhynchos_6_22340434_22340788_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

22340434 - 22340788

Intron Length:

355

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCT|GTGAGTATT

5'SS Class:

major

3'SS Sequence:

CCCCCGGCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTGGAA

U12 Branch Point Sequence:

TGGTCTGGAAAC

Flanking Amino Acid:

NLSDSYAAGFLWLNTLGLLA

Intron Amino Acid Position:

565

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.4

0.58

80.3

34.1

Major BPS

49.8

-0

1.4

51.3

44.2

Major PPT

64.4

0.33

0.9

56.4

33.5

Minor 5ss

39.1

-1.2

3.1

61.3

Minor BPS

-0.4

2.1

57.09

41.4

Associated Gene:

Gene:

HPSE2

Ensembl Gene ID:

ENSAPLG00000027024

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024628

22259389 - 22350960

91572