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Intron Name: Anas_platyrhynchos_platyrhynchos_6_22340904_22348851_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

22340904 - 22348851

Intron Length:

7948

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTAGGTCTG

5'SS Class:

major

3'SS Sequence:

CTCTGCCCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTGAC

U12 Branch Point Sequence:

TGCTGCTGACTG

Flanking Amino Acid:

LVDQNFNPLPDYWLSLLYKR

Intron Amino Acid Position:

604

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.6

0.6

1.1

47.6

Major BPS

66.3

0.4

1.1

41.8

Major PPT

0.49

0.8

65.4

30.5

Minor 5ss

36.9

-1.5

3.3

50.1

46.1

Minor BPS

43.3

-0.6

2.1

48.4

45.4

Associated Gene:

Gene:

HPSE2

Ensembl Gene ID:

ENSAPLG00000027024

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024628

22259389 - 22350960

91572