Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_6_22388140_22388307_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

22388140 - 22388307

Intron Length:

168

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTGAGCAGC

5'SS Class:

major

3'SS Sequence:

AGGTCTCCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AGCCCAC

U12 Branch Point Sequence:

GAGCCCACAGGC

Flanking Amino Acid:

PTLLARGARRVPRMLALCLL

Intron Amino Acid Position:

115

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.1

0.59

63.1

43.4

Major BPS

45.4

-0.2

1.2

49.9

36.8

Major PPT

65.2

0.34

0.9

55.2

40.8

Minor 5ss

33.8

-1.8

2.8

34.8

41.4

Minor BPS

35.9

-1

1.9

39.59

38.6

Associated Gene:

Gene:

CRTAC1

Ensembl Gene ID:

ENSAPLG00000011099

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046354

22387798 - 22395568

7771