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Intron Name: Anas_platyrhynchos_platyrhynchos_6_22390003_22390864_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

22390003 - 22390864

Intron Length:

862

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTGAGCCCC

5'SS Class:

major

3'SS Sequence:

CGTGCTCCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCTGAC

U12 Branch Point Sequence:

GCCCCCTGACCC

Flanking Amino Acid:

YFLNTNNAFSGMATYTDKLF

Intron Amino Acid Position:

302

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.5

0.56

57.1

42.2

Major BPS

56.5

0.16

1.1

48.6

36.6

Major PPT

0.41

0.9

58.1

38.5

Minor 5ss

34.2

-1.8

44.2

43.2

Minor BPS

47.4

-0.2

1.8

53.35

43.9

Associated Gene:

Gene:

CRTAC1

Ensembl Gene ID:

ENSAPLG00000011099

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046354

22387798 - 22395568

7771

ENSAPLT00000019432

22387798 - 22395568

7771

ENSAPLT00000011556

22387798 - 22395158

7361