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Intron Name: Anas_platyrhynchos_platyrhynchos_6_22390996_22391618_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

22390996 - 22391618

Intron Length:

623

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTGAGCAGG

5'SS Class:

major

3'SS Sequence:

CCGCCGGCCGCAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CGCTGAG

U12 Branch Point Sequence:

GGGCGCTGAGGC

Flanking Amino Acid:

GRSVACVDRTGSGRYSIYIA

Intron Amino Acid Position:

346

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.5

0.58

46.2

Major BPS

-0.2

1.6

40.4

42.3

Major PPT

0.16

0.9

34.1

Minor 5ss

33.8

-1.8

2.9

40.5

45.4

Minor BPS

35.9

-1

38.36

39.4

Associated Gene:

Gene:

CRTAC1

Ensembl Gene ID:

ENSAPLG00000011099

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046354

22387798 - 22395568

7771

ENSAPLT00000019432

22387798 - 22395568

7771

ENSAPLT00000011556

22387798 - 22395158

7361