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Intron Name: Anas_platyrhynchos_platyrhynchos_6_22392376_22392555_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

22392376 - 22392555

Intron Length:

180

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTGAGTAGG

5'SS Class:

strong_major

3'SS Sequence:

TTGCTGCTCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GCAGCAG

U12 Branch Point Sequence:

GTCCCCTTGCTG

Flanking Amino Acid:

GTYRDVAAAVGLDDPYQHGR

Intron Amino Acid Position:

443

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.9

0.73

68.8

43.8

Major BPS

33.8

-1

1.5

33.4

42.7

Major PPT

74.9

0.56

0.9

69.1

Minor 5ss

29.2

-2.4

2.5

25.2

36.6

Minor BPS

40.7

-0.8

3.4

52.45

42.7

Associated Gene:

Gene:

CRTAC1

Ensembl Gene ID:

ENSAPLG00000011099

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046354

22387798 - 22395568

7771

ENSAPLT00000019432

22387798 - 22395568

7771

ENSAPLT00000011556

22387798 - 22395158

7361