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Intron Name: Anas_platyrhynchos_platyrhynchos_6_22397696_22398078_R


Intron Information:

Intron Rank:
1

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
22397696 - 22398078

Intron Length:
383

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CGG|GTAGGGAAC

5'SS Class:
major

3'SS Sequence:
GCTTCTGCCCTAG|A

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TCTTCAC

U12 Branch Point Sequence:
TTTGTCTTCACC

Flanking Amino Acid:
QSSPPELESRIERQLFEETV

Intron Amino Acid Position:
274

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
71.5
0.51
1.1
63.9
42.4

Major BPS
77.5
0.68
1
79.6
33

Major PPT
66.3
0.37
0.9
58
38.5

Minor 5ss
30.7
-2.2
3.3
33.6
42.2

Minor BPS
64.1
0.43
1.9
77.35
39.1

Associated Gene:

Gene:
GOLGA7B

Ensembl Gene ID:

Chromosome:
6

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

22396169 - 22398897
2729