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Intron Name: Anas_platyrhynchos_platyrhynchos_6_22410442_22410577_R


Intron Information:

Intron Rank:
3

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
22410442 - 22410577

Intron Length:
136

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CCA|GTGAGTGGG

5'SS Class:
major

3'SS Sequence:
TGCCTCGTCCCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
CACTGAT

U12 Branch Point Sequence:
GGGCACTGATCT

Flanking Amino Acid:
LYWENPAVSSQFYGALLGSV

Intron Amino Acid Position:
246

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
69.5
0.46
1.1
57.2
42.1

Major BPS
71.2
0.53
1
61
37.5

Major PPT
69.9
0.45
0.9
60.8
40.2

Minor 5ss
28.8
-2.4
3.1
36.7
41.6

Minor BPS
44.1
-0.3
1.8
57.59
44

Associated Gene:

Gene:
ZFYVE27

Ensembl Gene ID:

Chromosome:
6

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

22408512 - 22411812
3301

22408512 - 22411812
3301