About Basic Search Advanced Search Downloads
Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_6_22410993_22411085_R


Intron Information:

Intron Rank:
1

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
22410993 - 22411085

Intron Length:
93

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GAG|GTGGGTGGG

5'SS Class:
major

3'SS Sequence:
GGGTGTCCTACAG|C

3'SS Class:
major_PPT

U2 Branch Point Sequence:
GTGTAAC

U12 Branch Point Sequence:
CGGGGCGTAACG

Flanking Amino Acid:
INLLLLTLDRAAWYSVLAVL

Intron Amino Acid Position:
152

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
79.1
0.69
1
63.1
43.4

Major BPS
56.8
0.17
1.4
61.4
43.2

Major PPT
66.8
0.38
1
57.9
43.3

Minor 5ss
25.2
-2.8
3.2
31
43.1

Minor BPS
40.6
-0.8
2.4
43.02
48.3

Associated Gene:

Gene:
ZFYVE27

Ensembl Gene ID:

Chromosome:
6

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

22408512 - 22411812
3301

22408512 - 22411812
3301