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Intron Name: Anas_platyrhynchos_platyrhynchos_6_22441735_22442032_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

22441735 - 22442032

Intron Length:

298

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAGGTGGC

5'SS Class:

strong_major

3'SS Sequence:

CCTCTTTCTGTAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CCTTAAC

U12 Branch Point Sequence:

GCTGCCTTAACC

Flanking Amino Acid:

VLASTPQFAEFLLPLLIEKM

Intron Amino Acid Position:

229

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.4

0.81

73.2

37.5

Major BPS

64.7

0.37

1.1

67.2

35.2

Major PPT

80.8

0.69

0.7

76.6

25.5

Minor 5ss

31.6

-2.1

3.4

43.4

44.3

Minor BPS

74.1

0.74

1.4

75.04

41.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000015404

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016100

22439538 - 22442855

3318