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Intron Name: Anas_platyrhynchos_platyrhynchos_6_22450775_22450967_R


Intron Information:

Intron Rank:
3

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
22450775 - 22450967

Intron Length:
193

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTAGGGCTG

5'SS Class:
major

3'SS Sequence:
TCCTCCCCCCTAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
AGCTGAC

U12 Branch Point Sequence:
TTGGAGCTGACA

Flanking Amino Acid:
ARTHHCSICNRCVLKMDHHC

Intron Amino Acid Position:
174

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
78.6
0.67
1.1
64.3
47.1

Major BPS
57.5
0.19
1.1
48.8
38.1

Major PPT
70.1
0.45
0.7
62.1
28.8

Minor 5ss
33
-1.9
3.6
46.2
49.1

Minor BPS
40.2
-0.7
2.4
55.81
43.3

Associated Gene:

Gene:
ZDHHC16

Ensembl Gene ID:

Chromosome:
6

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

22448689 - 22451830
3142