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Intron Name: Anas_platyrhynchos_platyrhynchos_6_22512023_22512571_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

22512023 - 22512571

Intron Length:

549

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCT|GTGAGTGGT

5'SS Class:

major

3'SS Sequence:

TCCTTCCCCGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCTGAC

U12 Branch Point Sequence:

AGCCCCTGACCC

Flanking Amino Acid:

AFDDLKELERLRLNRNQLHA

Intron Amino Acid Position:

118

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.2

0.48

1.1

65.6

40.2

Major BPS

56.5

0.16

1.1

48.6

36.6

Major PPT

78.2

0.63

0.7

25.2

Minor 5ss

31.9

-2.1

3.4

46.3

Minor BPS

48.1

-0.1

1.8

56.18

41.7

Associated Gene:

Gene:

SLIT1

Ensembl Gene ID:

ENSAPLG00000013620

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032183

22499353 - 22623948

124596

ENSAPLT00000025886

22499353 - 22623948

124596

ENSAPLT00000014255

22499353 - 22623948

124596

ENSAPLT00000032567

22499353 - 22626132

126780