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Intron Name: Anas_platyrhynchos_platyrhynchos_6_22512644_22612447_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

22512644 - 22612447

Intron Length:

99804

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCT|GTGAGTACC

5'SS Class:

major

3'SS Sequence:

CCTTCTCCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AGCTCAT

U12 Branch Point Sequence:

CACAGCTCATTT

Flanking Amino Acid:

LFQHNQALSRLDLSENFIQA

Intron Amino Acid Position:

142

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.1

0.5

1.1

68.2

36.6

Major BPS

70.9

0.52

1.1

71.4

36.6

Major PPT

78.2

0.63

0.7

72.8

25.4

Minor 5ss

34.5

-1.8

2.8

48.2

40.4

Minor BPS

39.5

-0.7

49.58

44.2

Associated Gene:

Gene:

SLIT1

Ensembl Gene ID:

ENSAPLG00000013620

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032183

22499353 - 22623948

124596

ENSAPLT00000025886

22499353 - 22623948

124596

ENSAPLT00000014255

22499353 - 22623948

124596

ENSAPLT00000032567

22499353 - 22626132

126780