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Intron Name: Anas_platyrhynchos_platyrhynchos_6_22542837_22542955_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

22542837 - 22542955

Intron Length:

119

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAAGACG

5'SS Class:

major

3'SS Sequence:

GCCGTGTGCCCAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTTCCAT

U12 Branch Point Sequence:

GCTTGTTCCATT

Flanking Amino Acid:

EEEAAQPRGDSMEEILADSE

Intron Amino Acid Position:

920

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.9

0.7

69.4

41.1

Major BPS

77.3

0.68

1.2

86.7

32.3

Major PPT

58.3

0.19

1.1

48.7

43.9

Minor 5ss

31.9

-2.1

3.1

40.4

45.5

Minor BPS

42.5

-0.5

2.2

59.97

44.4

Associated Gene:

Gene:

RRP12

Ensembl Gene ID:

ENSAPLG00000014387

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015082

22539790 - 22548835

9046