Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_6_22544543_22544659_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

22544543 - 22544659

Intron Length:

117

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTCAGCAGG

5'SS Class:

major

3'SS Sequence:

GCTGTCCCCGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCTGAC

U12 Branch Point Sequence:

GCCACCCTGACA

Flanking Amino Acid:

LYSTIQPSLQSKERSMQKKA

Intron Amino Acid Position:

632

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.1

0.55

1.3

63.6

48.1

Major BPS

56.5

0.16

1.1

48.6

36.6

Major PPT

69.3

0.43

0.9

34.8

Minor 5ss

34.2

-1.8

2.7

40.7

45.2

Minor BPS

49.1

-0

1.8

56.84

42.2

Associated Gene:

Gene:

RRP12

Ensembl Gene ID:

ENSAPLG00000014387

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015082

22539790 - 22548835

9046