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Intron Name: Anas_platyrhynchos_platyrhynchos_6_22544989_22545175_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

22544989 - 22545175

Intron Length:

187

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGCGCA

5'SS Class:

strong_major

3'SS Sequence:

GCCTGCCCTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCTGAC

U12 Branch Point Sequence:

GAGTCCTGACCG

Flanking Amino Acid:

RAYLTITDPQMVCGFLQKAS

Intron Amino Acid Position:

578

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.5

0.81

0.9

71.1

34.7

Major BPS

68.9

0.47

59.2

39.1

Major PPT

69.9

0.45

0.9

61.7

34.9

Minor 5ss

31.2

-2.2

3.2

38.8

46.5

Minor BPS

49.5

-0.1

1.9

54.46

45.9

Associated Gene:

Gene:

RRP12

Ensembl Gene ID:

ENSAPLG00000014387

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015082

22539790 - 22548835

9046