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Intron Name: Anas_platyrhynchos_platyrhynchos_6_22548549_22548653_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

22548549 - 22548653

Intron Length:

105

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCG|GTGAGCAGG

5'SS Class:

major

3'SS Sequence:

CTTCCCCCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGCCAAC

U12 Branch Point Sequence:

TGCCTGCCAACC

Flanking Amino Acid:

VSYLLNLVLKRVPSPVLIKK

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.5

0.58

46.2

Major BPS

48.7

-0

1.3

56.4

38.8

Major PPT

80.1

0.68

0.7

73.6

24.6

Minor 5ss

33.8

-1.8

2.9

40.5

45.4

Minor BPS

38.6

-0.8

2.3

49.19

40.7

Associated Gene:

Gene:

RRP12

Ensembl Gene ID:

ENSAPLG00000014387

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015082

22539790 - 22548835

9046