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Intron Name: Anas_platyrhynchos_platyrhynchos_6_22614612_22614714_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

22614612 - 22614714

Intron Length:

103

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCT|GTGAGTGCC

5'SS Class:

major

3'SS Sequence:

CCCTTTTCTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CCCTCAC

U12 Branch Point Sequence:

GACCCCTCACGC

Flanking Amino Acid:

AFQGLRSLNSLVLYGNKITD

Intron Amino Acid Position:

366

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.5

0.46

1.1

62.6

36.1

Major BPS

60.1

0.25

1.1

62.9

34.3

Major PPT

83.6

0.76

0.7

32.6

Minor 5ss

31.4

-2.1

3.2

45.9

42.3

Minor BPS

41.7

-0.6

46.04

42.3

Associated Gene:

Gene:

SLIT1

Ensembl Gene ID:

ENSAPLG00000013620

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014255

22499353 - 22623948

124596

ENSAPLT00000032567

22499353 - 22626132

126780

ENSAPLT00000032183

22499353 - 22623948

124596

ENSAPLT00000029549

22499353 - 22623948

124596

ENSAPLT00000025886

22499353 - 22623948

124596