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Intron Name: Anas_platyrhynchos_platyrhynchos_6_22615053_22615171_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

22615053 - 22615171

Intron Length:

119

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCT|GTGAGTGCC

5'SS Class:

major

3'SS Sequence:

GCCCTCGGCGCAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TGGTCAC

U12 Branch Point Sequence:

TGCTGGTCACCC

Flanking Amino Acid:

TFTSLRAIQTLHLAQNPFVC

Intron Amino Acid Position:

438

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.5

0.46

1.1

62.6

36.1

Major BPS

59.8

0.24

1.3

63.1

44.5

Major PPT

58.9

0.2

52.5

36.7

Minor 5ss

31.4

-2.1

3.2

45.9

42.3

Minor BPS

37.9

-0.9

2.5

50.68

46.1

Associated Gene:

Gene:

SLIT1

Ensembl Gene ID:

ENSAPLG00000013620

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014255

22499353 - 22623948

124596

ENSAPLT00000032567

22499353 - 22626132

126780

ENSAPLT00000032183

22499353 - 22623948

124596

ENSAPLT00000029549

22499353 - 22623948

124596

ENSAPLT00000025886

22499353 - 22623948

124596