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Intron Name: Anas_platyrhynchos_platyrhynchos_6_22615901_22616026_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

22615901 - 22616026

Intron Length:

126

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCT|GTAAGAGCT

5'SS Class:

major

3'SS Sequence:

CTGCCCACCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTCAG

U12 Branch Point Sequence:

ACCTCCTGAGCT

Flanking Amino Acid:

PERIPQSTAELRLNNNEISV

Intron Amino Acid Position:

549

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.3

0.48

1.1

65.9

38.1

Major BPS

0.52

1.5

79.6

35.6

Major PPT

64.8

0.33

0.9

Minor 5ss

-1.6

3.6

58.7

45.3

Minor BPS

56.6

0.29

1.8

71.26

45.4

Associated Gene:

Gene:

SLIT1

Ensembl Gene ID:

ENSAPLG00000013620

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014255

22499353 - 22623948

124596

ENSAPLT00000032567

22499353 - 22626132

126780

ENSAPLT00000032183

22499353 - 22623948

124596

ENSAPLT00000029549

22499353 - 22623948

124596

ENSAPLT00000025886

22499353 - 22623948

124596