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Intron Name: Anas_platyrhynchos_platyrhynchos_6_22616439_22616686_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

22616439 - 22616686

Intron Length:

248

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCT|GTGAGTCTC

5'SS Class:

major

3'SS Sequence:

TGATCCCCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTTAA

U12 Branch Point Sequence:

GTGCCCTGATCC

Flanking Amino Acid:

MFRGLDGLRTLMLRNNRISC

Intron Amino Acid Position:

622

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.2

0.48

1.1

65.6

40.2

Major BPS

72.1

0.55

1.2

63.7

43.9

Major PPT

69.5

0.44

0.9

62.7

34.2

Minor 5ss

36.2

-1.6

3.1

54.6

42.6

Minor BPS

50.4

-0

1.8

61.95

42.8

Associated Gene:

Gene:

SLIT1

Ensembl Gene ID:

ENSAPLG00000013620

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029549

22499353 - 22623948

124596

ENSAPLT00000025886

22499353 - 22623948

124596

ENSAPLT00000014255

22499353 - 22623948

124596

ENSAPLT00000032567

22499353 - 22626132

126780

ENSAPLT00000032183

22499353 - 22623948

124596