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Intron Name: Anas_platyrhynchos_platyrhynchos_6_22618585_22618807_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

22618585 - 22618807

Intron Length:

223

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGT|GTAAGTAGC

5'SS Class:

major

3'SS Sequence:

CTGTGTTTTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GCCCCAG

U12 Branch Point Sequence:

CTGGCCCCAGCC

Flanking Amino Acid:

QLSTFKYLQLVDLSNNRISS

Intron Amino Acid Position:

793

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.2

0.57

1.1

69.1

41.9

Major BPS

37.4

-0.7

1.5

40.1

Major PPT

81.9

0.72

0.9

76.3

37.7

Minor 5ss

38.1

-1.3

2.8

46.7

41.7

Minor BPS

41.5

-0.6

2.1

51.08

45.7

Associated Gene:

Gene:

SLIT1

Ensembl Gene ID:

ENSAPLG00000013620

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025886

22499353 - 22623948

124596

ENSAPLT00000032567

22499353 - 22626132

126780

ENSAPLT00000032183

22499353 - 22623948

124596

ENSAPLT00000029549

22499353 - 22623948

124596