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Intron Name: Anas_platyrhynchos_platyrhynchos_6_22618880_22619088_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

22618880 - 22619088

Intron Length:

209

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCT|GTAAGTGCG

5'SS Class:

major

3'SS Sequence:

TTCCCTTGCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCTCCT

U12 Branch Point Sequence:

TCCTCCTTCCCT

Flanking Amino Acid:

SFTNMSQLTTLILSYNSLQC

Intron Amino Acid Position:

794

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.8

0.54

1.1

63.1

41.5

Major BPS

32.6

-1

4.2

67.6

40.6

Major PPT

75.6

0.58

0.9

71.9

32.5

Minor 5ss

35.9

-1.6

3.2

51.6

44.8

Minor BPS

44.5

-0.3

3.6

75.03

47.8

Associated Gene:

Gene:

SLIT1

Ensembl Gene ID:

ENSAPLG00000013620

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032567

22499353 - 22626132

126780

ENSAPLT00000029549

22499353 - 22623948

124596

ENSAPLT00000014255

22499353 - 22623948

124596