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Intron Name: Anas_platyrhynchos_platyrhynchos_6_22618880_22619270_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

22618880 - 22619270

Intron Length:

391

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCT|GTAAGTGCG

5'SS Class:

major

3'SS Sequence:

CTGCTCTCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CGATCAC

U12 Branch Point Sequence:

GCTGCGATCACG

Flanking Amino Acid:

SFTNMSQLTTLSLHGNDISS

Intron Amino Acid Position:

817

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.8

0.54

1.1

63.1

41.5

Major BPS

50.8

0.02

1.2

55.1

40.4

Major PPT

74.5

0.55

0.8

31.5

Minor 5ss

35.9

-1.6

3.2

51.6

44.8

Minor BPS

37.8

-1.1

2.5

44.34

47.3

Associated Gene:

Gene:

SLIT1

Ensembl Gene ID:

ENSAPLG00000013620

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025886

22499353 - 22623948

124596