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Intron Name: Anas_platyrhynchos_platyrhynchos_6_22620534_22620687_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

22620534 - 22620687

Intron Length:

154

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGCATGG

5'SS Class:

major

3'SS Sequence:

CCTCTGTTCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCCCAC

U12 Branch Point Sequence:

TCGCTCCCACCG

Flanking Amino Acid:

YRCACPAGYKGRDCEVALDS

Intron Amino Acid Position:

939

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

65.6

0.37

1.2

54.3

45.6

Major BPS

1.2

61.8

35.9

Major PPT

76.3

0.59

0.8

67.8

37.6

Minor 5ss

41.5

-0.9

3.2

56.2

Minor BPS

38.8

-0.9

41.04

43.3

Associated Gene:

Gene:

SLIT1

Ensembl Gene ID:

ENSAPLG00000013620

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029549

22499353 - 22623948

124596

ENSAPLT00000025886

22499353 - 22623948

124596

ENSAPLT00000014255

22499353 - 22623948

124596

ENSAPLT00000032567

22499353 - 22626132

126780

ENSAPLT00000032183

22499353 - 22623948

124596