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Intron Name: Anas_platyrhynchos_platyrhynchos_6_22620786_22621321_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

22620786 - 22621321

Intron Length:

536

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGTGCA

5'SS Class:

strong_major

3'SS Sequence:

TTCTGCCTTGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CAAAAAT

U12 Branch Point Sequence:

TCACCCCCAAAA

Flanking Amino Acid:

QPQEGEGAGFRCLCAAGFEG

Intron Amino Acid Position:

971

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.3

0.97

0.7

80.2

27.1

Major BPS

50.5

0.01

1.1

57.3

34.4

Major PPT

0.65

0.8

73.7

31.4

Minor 5ss

27.5

-2.6

32.5

42.3

Minor BPS

45.5

-0.3

1.9

56.7

41.5

Associated Gene:

Gene:

SLIT1

Ensembl Gene ID:

ENSAPLG00000013620

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014255

22499353 - 22623948

124596

ENSAPLT00000032567

22499353 - 22626132

126780

ENSAPLT00000032183

22499353 - 22623948

124596

ENSAPLT00000029549

22499353 - 22623948

124596

ENSAPLT00000025886

22499353 - 22623948

124596