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Intron Name: Anas_platyrhynchos_platyrhynchos_6_22621462_22621616_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

22621462 - 22621616

Intron Length:

155

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAACTGGT

5'SS Class:

strong_major

3'SS Sequence:

TTCTGCCCCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGGGTAC

U12 Branch Point Sequence:

TTCTGCCCCACA

Flanking Amino Acid:

YTCLCPAHYTGDFCEQPPDF

Intron Amino Acid Position:

1018

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.1

0.76

1.1

76.2

39.9

Major BPS

42.6

-0.4

1.5

34.8

43.5

Major PPT

75.5

0.57

0.8

68.9

31.7

Minor 5ss

-1.1

3.3

58.7

45.8

Minor BPS

41.4

-0.6

2.5

59.96

45.8

Associated Gene:

Gene:

SLIT1

Ensembl Gene ID:

ENSAPLG00000013620

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029549

22499353 - 22623948

124596

ENSAPLT00000025886

22499353 - 22623948

124596

ENSAPLT00000014255

22499353 - 22623948

124596

ENSAPLT00000032567

22499353 - 22626132

126780

ENSAPLT00000032183

22499353 - 22623948

124596