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Intron Name: Anas_platyrhynchos_platyrhynchos_6_22621711_22621822_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

22621711 - 22621822

Intron Length:

112

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGCCCT

5'SS Class:

strong_major

3'SS Sequence:

GGGGCTGCCCCAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

GTCTCAG

U12 Branch Point Sequence:

GGAGTCTCAGCA

Flanking Amino Acid:

STCISTSQGPRCECVPGYVG

Intron Amino Acid Position:

1049

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.3

0.81

0.9

71.4

40.3

Major BPS

53.2

0.08

1.7

65.3

43.7

Major PPT

54.1

0.09

42.6

43.2

Minor 5ss

35.1

-1.7

3.1

48.4

47.3

Minor BPS

44.2

-0.4

1.8

49.92

40.7

Associated Gene:

Gene:

SLIT1

Ensembl Gene ID:

ENSAPLG00000013620

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029549

22499353 - 22623948

124596

ENSAPLT00000025886

22499353 - 22623948

124596

ENSAPLT00000014255

22499353 - 22623948

124596

ENSAPLT00000032567

22499353 - 22626132

126780

ENSAPLT00000032183

22499353 - 22623948

124596