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Intron Name: Anas_platyrhynchos_platyrhynchos_6_22621961_22622213_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

22621961 - 22622213

Intron Length:

253

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACCGCCG

5'SS Class:

major

3'SS Sequence:

CTCGGCCCCGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCCCAG

U12 Branch Point Sequence:

GTGCCCAGCACG

Flanking Amino Acid:

GYSCLCTEGYSGQLCEMPPR

Intron Amino Acid Position:

1095

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

63.3

0.31

1.3

47.1

Major BPS

49.3

-0

1.7

66.4

42.2

Major PPT

65.4

0.35

0.9

57.7

33.3

Minor 5ss

35.5

-1.6

3.4

48.5

47.2

Minor BPS

41.5

-0.8

2.1

47.87

44.6

Associated Gene:

Gene:

SLIT1

Ensembl Gene ID:

ENSAPLG00000013620

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029549

22499353 - 22623948

124596

ENSAPLT00000025886

22499353 - 22623948

124596

ENSAPLT00000014255

22499353 - 22623948

124596

ENSAPLT00000032567

22499353 - 22626132

126780

ENSAPLT00000032183

22499353 - 22623948

124596