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Intron Name: Anas_platyrhynchos_platyrhynchos_6_2265776_2286562_R

Intron Information:

Intron Rank:

133095

Intron Class:

major

Intron Phase:

Intron Coordinates:

2265776 - 2286562

Intron Length:

20787

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGTCAC

5'SS Class:

strong_major

3'SS Sequence:

CCTCTACCTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGAA

U12 Branch Point Sequence:

TCTCTCTTACTT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

94.6

1.05

0.7

81.4

32.7

Major BPS

87.2

0.92

0.8

77.7

37.1

Major PPT

75.8

0.58

0.8

66.1

34.8

Minor 5ss

34.5

-1.8

2.9

43.8

43.9

Minor BPS

61.6

0.44

1.6

76.4

40.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000018844

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024898

2263513 - 2287090

23578