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Intron Name: Anas_platyrhynchos_platyrhynchos_6_22735_24740_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

22735 - 24740

Intron Length:

2006

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAGTGTG

5'SS Class:

strong_major

3'SS Sequence:

TATTATTGTTTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTCAT

U12 Branch Point Sequence:

TGTTTATAAAGT

Flanking Amino Acid:

THLPQPHSVCGLIVEPMENW

Intron Amino Acid Position:

278

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.3

0.86

0.9

76.2

39.9

Major BPS

94.9

1.12

0.6

93.9

14.7

Major PPT

75.2

0.57

40.9

Minor 5ss

35.9

-1.6

3.3

40.9

45.3

Minor BPS

48.5

-0

2.2

73.22

43.6

Associated Gene:

Gene:

CHUK

Ensembl Gene ID:

ENSAPLG00000011503

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039931

12183 - 46227

34045

ENSAPLT00000037450

14485 - 44896

30412

ENSAPLT00000012207

12183 - 45972

33790