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Intron Name: Anas_platyrhynchos_platyrhynchos_6_22765870_22766081_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

22765870 - 22766081

Intron Length:

212

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTAAGTGCT

5'SS Class:

strong_major

3'SS Sequence:

ACTCTGTGCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTCCTAC

U12 Branch Point Sequence:

ACGGTCCTACTC

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.9

0.87

0.9

78.8

35.5

Major BPS

46.5

-0.2

1.4

44.1

40.5

Major PPT

65.8

0.36

57.2

42.7

Minor 5ss

34.9

-1.7

3.2

42.4

44.3

Minor BPS

41.1

-0.6

1.8

43.9

38.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000012284

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041008

22765593 - 22771991

6399

ENSAPLT00000012811

22765593 - 22772584

6992