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Intron Name: Anas_platyrhynchos_platyrhynchos_6_22768717_22768799_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

22768717 - 22768799

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGGGGT

5'SS Class:

strong_major

3'SS Sequence:

CCCCTCCTCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGGGAT

U12 Branch Point Sequence:

GGATTGGGGACA

Flanking Amino Acid:

GSSLAGDLEKVNSTLEKTPD

Intron Amino Acid Position:

314

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.1

0.83

0.9

38.2

Major BPS

56.3

0.16

1.6

57.1

49.4

Major PPT

73.9

0.54

0.7

67.9

25.5

Minor 5ss

25.5

-2.8

3.5

37.8

47.1

Minor BPS

35.7

-1.1

2.4

44.59

37.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000012284

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025660

22764986 - 22772584

7599

ENSAPLT00000012811

22765593 - 22772584

6992

ENSAPLT00000046790

22764986 - 22771991

7006

ENSAPLT00000041008

22765593 - 22771991

6399