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Intron Name: Anas_platyrhynchos_platyrhynchos_6_22769385_22769560_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

22769385 - 22769560

Intron Length:

176

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGC|GTGAGGCTC

5'SS Class:

weak_major

3'SS Sequence:

TCTGTGCCCGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCCGAC

U12 Branch Point Sequence:

GGGTGCCGACGG

Flanking Amino Acid:

LSNTGGDFFMAGVGFSFIFS

Intron Amino Acid Position:

439

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

58.8

0.21

1.3

54.8

44.4

Major BPS

47.5

-0.1

1.3

43.8

40.8

Major PPT

72.1

0.5

0.9

65.6

36.1

Minor 5ss

30.8

-2.2

3.4

37.3

40.6

Minor BPS

30.6

-1.6

2.1

30.19

40.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000012284

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046790

22764986 - 22771991

7006

ENSAPLT00000041008

22765593 - 22771991

6399

ENSAPLT00000012811

22765593 - 22772584

6992