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Intron Name: Anas_platyrhynchos_platyrhynchos_6_22769685_22769788_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

22769685 - 22769788

Intron Length:

104

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGGGATGC

5'SS Class:

major

3'SS Sequence:

CTTCTGCCCTCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCCTAC

U12 Branch Point Sequence:

CCGTGCCTACTG

Flanking Amino Acid:

ESWRSQQLFQLVDTPGLIPG

Intron Amino Acid Position:

481

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.9

0.61

62.9

38.7

Major BPS

47.5

-0.1

1.3

44.1

40.5

Major PPT

76.2

0.59

0.8

73.2

31.7

Minor 5ss

31.4

-2.1

3.3

41.3

45.4

Minor BPS

38.7

-0.9

2.2

38.71

45.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000012284

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041008

22765593 - 22771991

6399

ENSAPLT00000025660

22764986 - 22772584

7599

ENSAPLT00000012811

22765593 - 22772584

6992

ENSAPLT00000046790

22764986 - 22771991

7006