Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_6_22771760_22772205_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

22771760 - 22772205

Intron Length:

446

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGGGGAGC

5'SS Class:

major

3'SS Sequence:

TCCTTCTGCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CACTGAT

U12 Branch Point Sequence:

GCCCCACTGATG

Flanking Amino Acid:

YRRMHIADVYRNEAVEIGPM

Intron Amino Acid Position:

777

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.3

0.6

63.9

42.4

Major BPS

71.2

0.53

37.5

Major PPT

74.9

0.56

0.9

68.3

37.4

Minor 5ss

25.8

-2.8

3.2

33.4

42.1

Minor BPS

40.4

-0.9

1.8

38.61

38.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000012284

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025660

22764986 - 22772584

7599

ENSAPLT00000012811

22765593 - 22772584

6992