Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_6_22785576_22786484_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

22785576 - 22786484

Intron Length:

909

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACCACAG

5'SS Class:

major

3'SS Sequence:

TTTCCCTTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTTAT

U12 Branch Point Sequence:

ATCCTCTGAATT

Flanking Amino Acid:

HPIRVVNALQTLCALIRGVH

Intron Amino Acid Position:

103

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

65.4

0.36

1.2

53.6

45.3

Major BPS

87.7

0.94

0.8

77.7

36.7

Major PPT

89.5

0.89

0.6

84.5

23.1

Minor 5ss

35.8

-1.6

3.3

47.5

47.9

Minor BPS

59.5

0.38

1.4

72.32

38.7

Associated Gene:

Gene:

ARMH3

Ensembl Gene ID:

ENSAPLG00000011883

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012418

22784655 - 22877893

93239

ENSAPLT00000043501

22784655 - 22872436

87782