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Intron Name: Anas_platyrhynchos_platyrhynchos_6_22786593_22787719_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

22786593 - 22787719

Intron Length:

1127

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGGCCT

5'SS Class:

strong_major

3'SS Sequence:

TGTTCTTCTTTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AAATAAT

U12 Branch Point Sequence:

TAATACTTAAAA

Flanking Amino Acid:

GFDKAELCMKNLMESLDSLL

Intron Amino Acid Position:

139

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.7

0.82

0.9

72.1

39.1

Major BPS

71.2

0.53

70.3

31.9

Major PPT

0.74

0.7

81.8

30.3

Minor 5ss

27.9

-2.5

3.2

39.3

46.1

Minor BPS

65.2

0.47

1.6

72.56

38.2

Associated Gene:

Gene:

ARMH3

Ensembl Gene ID:

ENSAPLG00000011883

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043501

22784655 - 22872436

87782

ENSAPLT00000012418

22784655 - 22877893

93239