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Intron Name: Anas_platyrhynchos_platyrhynchos_6_22808988_22810043_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

22808988 - 22810043

Intron Length:

1056

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTGAGTCTT

5'SS Class:

strong_major

3'SS Sequence:

TGTGTGTTTGAAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

TTCTTCTGACTT

Flanking Amino Acid:

MNFRVNLHRMPMRHRKKAAD

Intron Amino Acid Position:

426

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.1

0.83

0.9

79.6

35.4

Major BPS

100

1.24

0.5

100

Major PPT

0.4

1.2

67.5

42.8

Minor 5ss

34.9

-1.7

3.1

47.1

42.6

Minor BPS

56.8

0.29

1.7

75.82

41.6

Associated Gene:

Gene:

ARMH3

Ensembl Gene ID:

ENSAPLG00000011883

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043501

22784655 - 22872436

87782

ENSAPLT00000012418

22784655 - 22877893

93239