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Intron Name: Anas_platyrhynchos_platyrhynchos_6_22942369_22943427_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

22942369 - 22943427

Intron Length:

1059

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAAACGA

5'SS Class:

major

3'SS Sequence:

TTTTCCTTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TACTGAT

U12 Branch Point Sequence:

TGCACCTTACTG

Flanking Amino Acid:

EPDTFLFCPTEYCGTFCYPN

Intron Amino Acid Position:

221

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.2

0.69

Major BPS

83.5

0.83

0.8

71.6

36.4

Major PPT

0.97

0.6

88.6

20.7

Minor 5ss

30.7

-2.2

3.1

39.6

45.7

Minor BPS

52.8

-0

1.8

56.54

45.1

Associated Gene:

Gene:

OGA

Ensembl Gene ID:

ENSAPLG00000011067

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035886

22935388 - 22959141

23754

ENSAPLT00000011559

22935388 - 22947299

11912