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Intron Name: Anas_platyrhynchos_platyrhynchos_6_22947030_22950409_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

22947030 - 22950409

Intron Length:

3380

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAGGTGCA

5'SS Class:

strong_major

3'SS Sequence:

CTGATCTCAACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATCTGAT

U12 Branch Point Sequence:

CTTCTCGTAACA

Flanking Amino Acid:

SMVKSFVQWLGCRSQSSAQF

Intron Amino Acid Position:

664

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.6

0.84

0.9

35.3

Major BPS

82.5

0.81

0.8

71.4

36.6

Major PPT

67.8

0.4

62.3

38.5

Minor 5ss

31.6

-2.1

3.3

41.1

45.4

Minor BPS

57.2

0.22

2.1

72.02

40.3

Associated Gene:

Gene:

OGA

Ensembl Gene ID:

ENSAPLG00000011067

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035886

22935388 - 22959141

23754