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Intron Name: Anas_platyrhynchos_platyrhynchos_6_23115971_23116632_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

23115971 - 23116632

Intron Length:

662

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGGTAT

5'SS Class:

strong_major

3'SS Sequence:

CTTCCTGTCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CAATAAT

U12 Branch Point Sequence:

CTTCCTGTCACA

Flanking Amino Acid:

VSASGDRTIKVWNTSTCEFV

Intron Amino Acid Position:

453

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.5

0.88

0.8

80.8

28.9

Major BPS

67.7

0.44

1.1

67.9

34.4

Major PPT

77.1

0.61

0.8

71.3

33.1

Minor 5ss

-1.9

3.4

45.9

49.3

Minor BPS

46.4

-0.2

2.4

63.93

Associated Gene:

Gene:

BTRC

Ensembl Gene ID:

ENSAPLG00000008388

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047731

23108109 - 23201303

93195

ENSAPLT00000024667

23108009 - 23171903

63895

ENSAPLT00000021619

23105980 - 23190047

84068

ENSAPLT00000008717

23108009 - 23201303

93295