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Intron Name: Anas_platyrhynchos_platyrhynchos_6_23120933_23125210_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

23120933 - 23125210

Intron Length:

4278

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTGAGGGAA

5'SS Class:

major

3'SS Sequence:

CTTTGTCTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTCAA

U12 Branch Point Sequence:

TTCTGTTCAATG

Flanking Amino Acid:

LWRGLSERRGWGQYLFKNKP

Intron Amino Acid Position:

251

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.9

0.66

0.9

67.1

33.4

Major BPS

75.6

0.64

1.1

77.7

37.1

Major PPT

87.2

0.84

0.7

84.6

30.3

Minor 5ss

23.2

-3.1

3.2

24.9

38.7

Minor BPS

-0.2

58.73

Associated Gene:

Gene:

BTRC

Ensembl Gene ID:

ENSAPLG00000008388

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021619

23105980 - 23190047

84068

ENSAPLT00000008717

23108009 - 23201303

93295

ENSAPLT00000047731

23108109 - 23201303

93195

ENSAPLT00000024667

23108009 - 23171903

63895